Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PQ457_17395 | Q1CBU1 | + | 302357 - 305221 | 102257.0 |
| tryptophan 7-halogenase | PQ457_17400 | Q8KHZ8 | + | 305288 - 306832 | 57927.3 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | PQ457_17405 | D5EY15 | + | 306966 - 309566 | 92447.7 |
| glycoside hydrolase family 95 protein | PQ457_17410 | Q8L7W8 | - | 309652 - 311988 | 84495.2 |
| galactose mutarotase | PQ457_17415 | Q8K157 | + | 312163 - 313299 | 40175.7 |
| fcd domain-containing protein | PQ457_17420 | P31460 | - | 313335 - 314069 | 26832.2 |
| carboxylesterase family protein | PQ457_17425 | P37967 | - | 314142 - 315830 | 60091.5 |
| family 43 glycosylhydrolase | PQ457_17430 | Q93HT9 | - | 315878 - 317320 | 51735.2 |
| acetylxylan esterase | PQ457_17435 | Not Available | - | 317350 - 318015 | 23603.4 |
| xylose isomerase | PQ457_17440 | Q2GAB9 | - | 318313 - 319620 | 48483.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.