Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | PQ457_17345 | A4IPB5 | + | 287693 - 288649 | 35529.2 |
| sugar phosphate isomerase/epimerase | PQ457_17350 | B5F3F3 | + | 288669 - 289604 | 35910.9 |
| glycoside hydrolase family 127 protein | PQ457_17355 | E8MGH8 | - | 289936 - 291900 | 73592.6 |
| sialate o-acetylesterase | PQ457_17360 | Q5RFU0 | + | 292181 - 294115 | 68422.8 |
| laci family dna-binding transcriptional regulator | PQ457_17365 | P46828 | - | 294125 - 295177 | 38205.2 |
| alpha-l-arabinofuranosidase c-terminal domain-containing protein | PQ457_17370 | Q59219 | + | 295441 - 297015 | 56746.9 |
| npcbm/new2 domain-containing protein | PQ457_17375 | P14749 | - | 297145 - 299052 | 68847.8 |
| alpha/beta fold hydrolase | PQ457_17380 | D5EXZ4 | - | 299049 - 300107 | 38117.3 |
| cupin-like domain-containing protein | PQ457_17385 | Q5BKC6 | - | 300284 - 301306 | 38098.6 |
| sapc family protein | PQ457_17390 | Not Available | - | 301309 - 301992 | 24551.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.