Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | PQ457_17245 | Q53196 | - | 254964 - 256328 | 49396.5 |
| lysr family transcriptional regulator | PQ457_17250 | P30864 | + | 256590 - 257534 | 34526.8 |
| acyl-coa dehydrogenase family protein | PQ457_17255 | Q0S811 | - | 257624 - 258805 | 43857.0 |
| tonb-dependent receptor | PQ457_17260 | P46359 | + | 259182 - 261437 | 82499.9 |
| nad(p)h-dependent oxidoreductase | PQ457_17265 | Q88R97 | + | 261519 - 262106 | 20458.0 |
| autotransporter-associated beta strand repeat-containing protein | PQ457_17270 | Not Available | - | 262302 - 271598 | 300726.0 |
| marr family winged helix-turn-helix transcriptional regulator | PQ457_17275 | P94578 | - | 272218 - 272676 | 17305.1 |
| duf3237 family protein | PQ457_17280 | B3Q9N8 | + | 272759 - 273241 | 18200.7 |
| coce/nond family hydrolase | PQ457_17285 | Q9L9D7 | + | 273243 - 274928 | 63145.6 |
| duf3237 domain-containing protein | PQ457_17290 | P61167 | + | 274925 - 275398 | 17329.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.