Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PQ457_17195 | P46359 | - | 243779 - 245917 | 75805.5 |
| helix-turn-helix transcriptional regulator | PQ457_17200 | Not Available | + | 246130 - 247236 | 40560.2 |
| glycosyl hydrolase | PQ457_17205 | Q3MUH7 | + | 247340 - 248368 | 38002.7 |
| voc family protein | PQ457_17210 | Not Available | + | 248355 - 248798 | 16183.3 |
| arac family transcriptional regulator | PQ457_17215 | P9WMJ2 | - | 248737 - 249819 | 39390.5 |
| glutamine synthetase family protein | PQ457_17220 | P0C7B6 | + | 249961 - 251292 | 47777.1 |
| hypothetical protein | PQ457_17225 | Q9M0A6 | + | 251297 - 252046 | 27065.2 |
| cytochrome p450 | PQ457_17230 | A0R4Y3 | + | 252043 - 253305 | 46612.5 |
| carboxymuconolactone decarboxylase family protein | PQ457_17235 | P20370 | - | 253345 - 253731 | 14299.2 |
| mfs transporter | PQ457_17240 | Not Available | - | 253728 - 254909 | 39930.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.