Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | PQ457_17045 | O34660 | + | 211012 - 212508 | 52578.6 |
| fad-binding oxidoreductase | PQ457_17050 | Q9AGP3 | - | 212550 - 213842 | 45939.6 |
| rid family hydrolase | PQ457_17055 | Q10121 | - | 213857 - 214279 | 15203.3 |
| tyramine oxidase subunit b | PQ457_17060 | Q2G1N2 | - | 214312 - 215460 | 41638.1 |
| arac family transcriptional regulator ligand-binding domain-containing protein | PQ457_17065 | P9WMJ2 | + | 215607 - 216674 | 39850.8 |
| duf6152 family protein | PQ457_17070 | Not Available | - | 216676 - 217038 | 12987.8 |
| hypothetical protein | PQ457_17075 | Not Available | - | 217067 - 217570 | 18448.8 |
| hypothetical protein | PQ457_17080 | Not Available | - | 217623 - 218087 | 16996.3 |
| alpha/beta hydrolase domain-containing protein | PQ457_17085 | Not Available | - | 218242 - 219789 | 58143.2 |
| cytochrome c | PQ457_17090 | Not Available | + | 219988 - 220548 | 19638.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.