Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | PQ457_16995 | O07458 | + | 198736 - 199194 | 16918.6 |
| marr family winged helix-turn-helix transcriptional regulator | PQ457_17000 | Not Available | + | 199218 - 199655 | 15868.4 |
| amp-binding protein | PQ457_17005 | Q0K844 | + | 199737 - 201353 | 58368.0 |
| thiolase family protein | PQ457_17010 | D1AB74 | + | 201350 - 202519 | 41370.4 |
| sdr family nad(p)-dependent oxidoreductase | PQ457_17015 | Q6GDV6 | + | 202519 - 203736 | 42512.4 |
| pqq-dependent sugar dehydrogenase | PQ457_17020 | P73001 | - | 203783 - 205033 | 43855.9 |
| tonb-dependent receptor | PQ457_17025 | P46359 | - | 205044 - 207221 | 78497.7 |
| pepsy-associated tm helix domain-containing protein | PQ457_17030 | Not Available | - | 207325 - 208584 | 47017.4 |
| hypothetical protein | PQ457_17035 | Not Available | - | 208825 - 209319 | 17877.0 |
| apc family permease | PQ457_17040 | A2RHI9 | + | 209538 - 210980 | 50225.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.