Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | + | 209595 - 212388 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 212561 - 212675 | Not Available |
| aldehyde dehydrogenase family protein | PQ457_00950 | A1B4L2 | + | 212911 - 214431 | 55009.0 |
| hypothetical protein | PQ457_00955 | Not Available | - | 214500 - 214862 | 13627.1 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | PQ457_00960 | Q5NR50 | - | 215053 - 216177 | 39601.6 |
| gnat family n-acetyltransferase | PQ457_00965 | P94562 | - | 216243 - 216698 | 16885.5 |
| rdd family protein | PQ457_00970 | Not Available | - | 216695 - 217585 | 32645.9 |
| stage ii sporulation protein m | PQ457_00975 | Not Available | - | 217582 - 218628 | 37915.7 |
| duf58 domain-containing protein | PQ457_00980 | P9WLX4 | - | 218625 - 219926 | 46564.1 |
| moxr family atpase | PQ457_00985 | P94474 | - | 219973 - 220926 | 33920.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.