Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | PQ457_16895 | Not Available | - | 174058 - 175335 | 44103.1 |
| laci family dna-binding transcriptional regulator | PQ457_16900 | P46828 | - | 175340 - 176389 | 37833.4 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | PQ457_16905 | Q23892 | + | 176542 - 178959 | 84629.2 |
| tonb-dependent receptor | PQ457_16910 | Not Available | + | 178988 - 181888 | 103931.0 |
| cupin-like domain-containing protein | PQ457_16915 | Q96EW2 | - | 181950 - 182945 | 36821.2 |
| sapc family protein | PQ457_16920 | Not Available | + | 183009 - 183731 | 25589.5 |
| tryptophan 7-halogenase | PQ457_16925 | Q8KHZ8 | + | 183721 - 185256 | 56156.7 |
| tetr/acrr family transcriptional regulator | PQ457_16930 | Not Available | - | 185278 - 185973 | 25221.1 |
| sugar phosphate isomerase/epimerase | PQ457_16935 | A6M225 | + | 186305 - 187243 | 35277.1 |
| tim barrel protein | PQ457_16940 | Q5KYR1 | + | 187256 - 188212 | 34858.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.