Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | PQ457_16845 | P77376 | - | 161329 - 162354 | 36253.5 |
| lysr family transcriptional regulator | PQ457_16850 | P0A4T6 | - | 162430 - 163317 | 31648.4 |
| llm class flavin-dependent oxidoreductase | PQ457_16855 | Q0K9I0 | + | 163445 - 164560 | 39482.3 |
| hypothetical protein | PQ457_16860 | Q1CS25 | + | 164557 - 165537 | 34633.3 |
| llm class flavin-dependent oxidoreductase | PQ457_16865 | Q6CYU4 | - | 165534 - 166607 | 38371.6 |
| mfs transporter | PQ457_16870 | P74168 | - | 166604 - 167977 | 47716.2 |
| alpha/beta hydrolase | PQ457_16875 | Q82SL8 | - | 168011 - 168985 | 36338.9 |
| tonb-dependent receptor | PQ457_16880 | P46359 | + | 169537 - 172095 | 90820.1 |
| class i sam-dependent methyltransferase | PQ457_16885 | A6UYW3 | - | 172429 - 173568 | 41247.5 |
| hypothetical protein | PQ457_16890 | Not Available | - | 173568 - 173867 | 11042.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.