Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | PQ457_16795 | O13842 | - | 149618 - 150538 | 34006.1 |
| polysaccharide deacetylase family protein | PQ457_16800 | O13842 | - | 150535 - 151419 | 33726.7 |
| isochorismatase family protein | PQ457_16805 | Q88FY5 | - | 151412 - 152101 | 25715.2 |
| tonb-dependent receptor | PQ457_16810 | P0C2M9 | - | 152227 - 154449 | 80199.5 |
| alpha/beta hydrolase | PQ457_16815 | D5EV35 | + | 154799 - 155758 | 34068.1 |
| nad-dependent succinate-semialdehyde dehydrogenase | PQ457_16820 | Q9I6M5 | + | 155758 - 157212 | 50267.6 |
| duf1330 domain-containing protein | PQ457_16825 | Not Available | + | 157324 - 157614 | 10394.4 |
| formylglycine-generating enzyme family protein | PQ457_16830 | Q8BPG6 | + | 157778 - 158725 | 33492.6 |
| molybdopterin-dependent oxidoreductase | PQ457_16835 | Q51698 | + | 158722 - 160893 | 76192.5 |
| (2fe-2s)-binding protein | PQ457_16840 | Q51697 | + | 160890 - 161342 | 15660.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.