Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | PQ457_16695 | O34873 | - | 128900 - 129817 | 31803.5 |
| 3-isopropylmalate dehydratase small subunit | PQ457_16700 | Q44022 | - | 129814 - 130401 | 20886.1 |
| 3-isopropylmalate dehydratase large subunit | PQ457_16705 | Q89X98 | - | 130398 - 131768 | 47384.7 |
| zinc-binding dehydrogenase | PQ457_16710 | Q8BGC4 | - | 131768 - 132796 | 35724.8 |
| fad-binding oxidoreductase | PQ457_16715 | P94535 | - | 132793 - 134400 | 57635.2 |
| fad-dependent oxidoreductase | PQ457_16720 | P83223 | - | 134495 - 135880 | 47847.0 |
| hypothetical protein | PQ457_16725 | Not Available | - | 135880 - 136242 | 13174.5 |
| class i sam-dependent methyltransferase | PQ457_16730 | Q55423 | - | 136239 - 137465 | 45738.1 |
| redy-like protein hapk | PQ457_16735 | Not Available | + | 137656 - 137964 | 11034.1 |
| sdr family oxidoreductase | PQ457_16740 | Q9ZNN8 | + | 137961 - 138788 | 28483.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.