Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m24 family metallopeptidase | PQ457_16645 | P53581 | + | 118034 - 119332 | 46389.9 |
| llm class flavin-dependent oxidoreductase | PQ457_16650 | P54993 | + | 119329 - 120153 | 28623.6 |
| llm class flavin-dependent oxidoreductase | PQ457_16655 | P54950 | + | 120153 - 121382 | 44208.8 |
| alpha/beta hydrolase | PQ457_16660 | O05235 | + | 121379 - 122356 | 36123.4 |
| serine hydrolase | PQ457_16665 | P07061 | - | 122353 - 123549 | 42705.8 |
| fad-dependent monooxygenase | PQ457_16670 | C1I201 | + | 123751 - 124956 | 44985.6 |
| arylmalonate decarboxylase | PQ457_16675 | Q88FY4 | + | 125048 - 125794 | 26969.2 |
| hypothetical protein | PQ457_16680 | Not Available | + | 125965 - 126642 | 26052.5 |
| hypothetical protein | PQ457_16685 | Not Available | - | 126791 - 127699 | 32908.9 |
| caib/baif coa-transferase family protein | PQ457_16690 | K3VD64 | - | 127722 - 128903 | 42175.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.