Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1838 family protein | PQ457_16545 | Not Available | - | 93850 - 94776 | 33852.2 |
| sdr family nad(p)-dependent oxidoreductase | PQ457_16550 | Q9KJF1 | - | 94799 - 95563 | 26567.8 |
| hypothetical protein | PQ457_16555 | Not Available | + | 95682 - 96644 | 33634.3 |
| isochorismatase family protein | PQ457_16560 | Q88FY5 | - | 96631 - 97260 | 22762.1 |
| 3-isopropylmalate dehydratase small subunit | PQ457_16565 | B6IYC9 | - | 97257 - 97880 | 22348.4 |
| 3-isopropylmalate dehydratase large subunit | PQ457_16570 | Q67MJ2 | - | 97877 - 99301 | 49940.9 |
| alpha/beta hydrolase | PQ457_16575 | Q52011 | - | 99312 - 100307 | 36305.1 |
| fad-dependent oxidoreductase | PQ457_16580 | O34363 | + | 100545 - 101996 | 51230.9 |
| polysaccharide deacetylase family protein | PQ457_16585 | O13842 | + | 102098 - 103024 | 35412.8 |
| fad-dependent monooxygenase | PQ457_16590 | Q3S4B7 | + | 103021 - 104172 | 41402.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.