Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c family protein | PQ457_16445 | P04657 | + | 73422 - 73808 | 13196.5 |
| alpha/beta fold hydrolase | PQ457_16450 | Not Available | + | 73808 - 74716 | 31089.4 |
| hypothetical protein | PQ457_16455 | Not Available | - | 74799 - 75161 | 13456.9 |
| methyltransferase domain-containing protein | PQ457_16460 | Q72HI4 | - | 75173 - 76402 | 45522.0 |
| duf1838 family protein | PQ457_16465 | Not Available | + | 76620 - 77657 | 38332.8 |
| fad-binding oxidoreductase | PQ457_16470 | P94535 | - | 77723 - 79282 | 55172.4 |
| cytochrome b/b6 domain-containing protein | PQ457_16475 | P75925 | + | 79476 - 80096 | 22325.5 |
| ureidoglycolate lyase | PQ457_16480 | C1DFA8 | + | 80093 - 80662 | 20566.5 |
| hypothetical protein | PQ457_16485 | Not Available | + | 80655 - 81017 | 13214.7 |
| class i sam-dependent methyltransferase | PQ457_16490 | A6UYW3 | + | 81030 - 82235 | 44965.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.