Novosphingobium humi R1-4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium humi
StrainR1-4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium humi R1-4

Accession NumberCP117417.1

Gene Summary

Adenine Count

624047 bp

Thymine Count

625173 bp

Guanine Count

1097387 bp

Cytosine Count

1092600 bp

Genome Length

3439207 bp

Protein-coding Genes

3068 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
multidrug efflux rnd transporter permease subunitPQ457_16295Q8FWV9-42026 - 45208113741.0
efflux rnd transporter periplasmic adaptor subunitPQ457_16300P0AE07-45228 - 4651145325.1
tetr/acrr family transcriptional regulatorPQ457_16305P75952-46948 - 4757422652.1
pyrimidine utilization protein bPQ457_16310D0LI56+47735 - 4847526357.3
pyrimidine utilization protein cPQ457_16315D0LI57+48475 - 4885813405.2
pyrimidine utilization protein dPQ457_16320B0SW62+48858 - 4966429364.0
pyrimidine utilization protein aPQ457_16325D0LI58+49669 - 5072738943.5
nucleoside 2-deoxyribosyltransferase domain-containing proteinPQ457_16330Not Available-50767 - 5133320362.7
hypothetical proteinPQ457_16335Not Available+51314 - 514363902.83
sigma 54-interacting transcriptional regulatorPQ457_16340Q43965-51403 - 5300758726.4

Displaying genes 3261 – 3270 of 4435 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites