Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dha2 family efflux mfs transporter permease subunit | PQ457_16195 | P0AEJ1 | + | 14385 - 15917 | 53460.3 |
| duf1636 domain-containing protein | PQ457_16200 | Not Available | + | 16362 - 16769 | 14342.1 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | PQ457_16205 | Q2GBJ7 | + | 16766 - 17794 | 34148.4 |
| histidine phosphatase family protein | PQ457_16210 | P9WLH5 | + | 17803 - 18345 | 19198.1 |
| adenosylcobinamide-gdp ribazoletransferase | PQ457_16215 | Q2GBJ9 | + | 18342 - 19043 | 24391.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | PQ457_16220 | Q9I468 | + | 19040 - 19993 | 33997.5 |
| adenosylcobinamide-phosphate synthase cbib | PQ457_16225 | P0CY56 | + | 19986 - 20906 | 32060.4 |
| cobyric acid synthase | PQ457_16230 | A5VFK5 | + | 20894 - 22345 | 50035.7 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | PQ457_16235 | P29931 | + | 22342 - 22851 | 17869.7 |
| ceha/mcba family metallohydrolase | PQ457_16240 | Not Available | + | 22892 - 24034 | 42205.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.