Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tim barrel protein | PQ457_16145 | Q5T013 | + | 4033 - 4812 | 27401.0 |
| malonyl-coa decarboxylase | PQ457_16150 | P12617 | + | 4999 - 6363 | 50136.3 |
| malonyl-coa synthase | PQ457_16155 | O07610 | - | 6367 - 7884 | 54173.2 |
| gntr family transcriptional regulator | PQ457_16160 | P32425 | + | 8024 - 8680 | 24212.0 |
| methyl-accepting chemotaxis protein | PQ457_16165 | Not Available | + | 8724 - 9065 | 11659.2 |
| malonate transporter subunit madm | PQ457_16170 | Not Available | + | 9082 - 9843 | 25355.0 |
| mfs transporter | PQ457_16175 | Q62I47 | - | 9827 - 10993 | 39638.9 |
| tetr/acrr family transcriptional regulator | PQ457_16180 | Q88FX7 | - | 11072 - 11665 | 21551.1 |
| efflux transporter outer membrane subunit | PQ457_16185 | P24126 | + | 11765 - 13198 | 49479.4 |
| hlyd family secretion protein | PQ457_16190 | Q9RQ30 | + | 13213 - 14388 | 41151.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.