Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell wall hydrolase | PQ457_16090 | P50739 | - | 3434437 - 3435048 | 21868.8 |
| duf1491 family protein | PQ457_16095 | Not Available | - | 3435246 - 3435542 | 11096.0 |
| pts sugar transporter subunit iia | PQ457_16100 | P30335 | - | 3435593 - 3436051 | 16107.7 |
| ribosome-associated translation inhibitor raia | PQ457_16105 | P17265 | - | 3436253 - 3436819 | 20853.8 |
| dna polymerase iii subunit epsilon | PQ457_16110 | Q1RJM1 | - | 3436854 - 3437546 | 25440.3 |
| dephospho-coa kinase | PQ457_16115 | Q2GC60 | - | 3437606 - 3438217 | 21070.6 |
| shikimate dehydrogenase | PQ457_16120 | Q1GP77 | - | 3438214 - 3439062 | 29376.6 |
| gluconate 2-dehydrogenase subunit 3 family protein | PQ457_16130 | Not Available | + | 395 - 928 | 18736.7 |
| gmc family oxidoreductase | PQ457_16135 | Q3YAT3 | + | 942 - 2615 | 60995.2 |
| mfs transporter | PQ457_16140 | P46105 | + | 2617 - 4014 | 48023.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.