Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_16040 | Not Available | - | 3426885 - 3427493 | 21727.5 |
| demethoxyubiquinone hydroxylase family protein | PQ457_16045 | Q2RNK3 | - | 3427603 - 3428121 | 18869.6 |
| disulfide bond formation protein b | PQ457_16050 | Q5P2Z1 | - | 3428123 - 3428602 | 16776.8 |
| s41 family peptidase | PQ457_16055 | Q44879 | - | 3428604 - 3429941 | 47768.2 |
| peptidoglycan dd-metalloendopeptidase family protein | PQ457_16060 | P45682 | - | 3430018 - 3431211 | 41484.5 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | PQ457_16065 | Q2GCB7 | - | 3431236 - 3431658 | 15659.9 |
| ribosome silencing factor | PQ457_16070 | Q5NLX3 | - | 3431713 - 3432120 | 14483.3 |
| nicotinate-nucleotide adenylyltransferase | PQ457_16075 | Q2N6F4 | - | 3432221 - 3432847 | 22984.1 |
| glutamate-5-semialdehyde dehydrogenase | PQ457_16080 | Q2GCB4 | - | 3432874 - 3434160 | 44059.0 |
| duf1289 domain-containing protein | PQ457_16085 | Q8CW10 | - | 3434199 - 3434366 | 5822.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.