Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | PQ457_15940 | P52558 | + | 3408714 - 3409202 | 16732.4 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | PQ457_15945 | P52559 | + | 3409206 - 3410264 | 37376.8 |
| dihydrofolate reductase | PQ457_15950 | P12833 | + | 3410264 - 3410752 | 17309.9 |
| bifunctional riboflavin kinase/fad synthetase | PQ457_15955 | P0AG42 | + | 3410765 - 3411694 | 33263.6 |
| duf3035 domain-containing protein | PQ457_15960 | Not Available | - | 3412015 - 3412431 | 14356.1 |
| signal peptidase ii | PQ457_15965 | Q1GQK7 | - | 3412438 - 3412983 | 19470.3 |
| isoleucine--trna ligase | PQ457_15970 | Q5NQQ7 | - | 3412980 - 3415874 | 108946.0 |
| hemolysin family protein | PQ457_15975 | P74409 | - | 3416168 - 3417478 | 46759.8 |
| ompa family protein | PQ457_15980 | P37665 | + | 3417679 - 3418368 | 23741.3 |
| metallophosphoesterase | PQ457_15985 | Q6XBH1 | - | 3418390 - 3419112 | 25986.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.