Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | PQ457_15890 | P19391 | - | 3401558 - 3402367 | 30095.2 |
| hypothetical protein | PQ457_15895 | Not Available | - | 3402421 - 3403518 | 39628.0 |
| fkbm family methyltransferase | PQ457_15900 | Q42539 | - | 3403521 - 3404390 | 32061.8 |
| abc transporter atp-binding protein | PQ457_15905 | P57013 | + | 3404534 - 3405196 | 24688.4 |
| integrase core domain-containing protein | PQ457_15910 | Not Available | + | 3405300 - 3406015 | 26275.4 |
| hypothetical protein | PQ457_15915 | Q5JXM2 | - | 3405948 - 3406703 | 28514.3 |
| integrase core domain-containing protein | PQ457_15920 | P59800 | - | 3406860 - 3407069 | 7566.94 |
| Trna-thr | Not Available | Not Available | + | 3407510 - 3407584 | Not Available |
| hypothetical protein | PQ457_15930 | Not Available | + | 3407746 - 3407892 | 5421.25 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | PQ457_15935 | Q2G373 | + | 3408023 - 3408709 | 25665.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.