Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide export protein | PQ457_15790 | P22236 | + | 3371257 - 3372390 | 39885.9 |
| glycosyltransferase family 1 protein | PQ457_15795 | A4FQ08 | + | 3372401 - 3373693 | 47144.4 |
| porin family protein | PQ457_15800 | Not Available | + | 3373690 - 3375072 | 49853.9 |
| transferrin-binding protein-like solute binding protein | PQ457_15805 | Not Available | + | 3375091 - 3376137 | 35162.1 |
| sdr family nad(p)-dependent oxidoreductase | PQ457_15810 | P25970 | - | 3376144 - 3376908 | 26332.1 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | PQ457_15815 | Q609V1 | - | 3376905 - 3378269 | 47954.9 |
| type i polyketide synthase | PQ457_15820 | Q7TXL8 | - | 3378301 - 3385629 | 255941.0 |
| glycosyltransferase | PQ457_15825 | C7R101 | + | 3385904 - 3387238 | 49028.6 |
| cdp-alcohol phosphatidyltransferase family protein | PQ457_15830 | Q6A8U1 | + | 3387235 - 3387933 | 26043.4 |
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | PQ457_15835 | A8I5B0 | + | 3388055 - 3389479 | 50107.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.