Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | PQ457_15740 | Q986A5 | - | 3361819 - 3363099 | 43928.2 |
| exodeoxyribonuclease vii large subunit | PQ457_15745 | Q2N6Q7 | + | 3363098 - 3364588 | 53243.2 |
| duf2093 domain-containing protein | PQ457_15750 | Not Available | + | 3364607 - 3364807 | 7350.81 |
| m23 family metallopeptidase | PQ457_15755 | A0A0H3C9Q9 | + | 3364830 - 3365681 | 30250.4 |
| complex i ndufa9 subunit family protein | PQ457_15760 | P34943 | - | 3365671 - 3366600 | 32058.2 |
| Trna-leu | Not Available | Not Available | + | 3366826 - 3366912 | Not Available |
| glucose-1-phosphate thymidylyltransferase rfba | PQ457_15770 | P55464 | - | 3367012 - 3367935 | 33432.4 |
| dtdp-4-dehydrorhamnose reductase | PQ457_15775 | P55463 | - | 3367932 - 3368909 | 33459.9 |
| dtdp-glucose 4,6-dehydratase | PQ457_15780 | P55462 | - | 3368906 - 3369961 | 39532.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | PQ457_15785 | P55468 | - | 3369966 - 3370529 | 20874.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.