Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional | PQ457_15640 | Q92R86 | + | 3344396 - 3347107 | 96332.8 |
| peroxiredoxin | PQ457_15645 | Q796Y8 | + | 3347104 - 3347574 | 16676.9 |
| ferritin-like domain-containing protein | PQ457_15650 | P43935 | + | 3347838 - 3348635 | 29375.2 |
| m23 family metallopeptidase | PQ457_15655 | P44693 | + | 3348781 - 3349509 | 25437.2 |
| hypothetical protein | PQ457_15660 | Not Available | - | 3349511 - 3349804 | 10470.1 |
| long-chain fatty acid--coa ligase | PQ457_15665 | B2HGV4 | - | 3349916 - 3351736 | 66424.5 |
| quinone-dependent dihydroorotate dehydrogenase | PQ457_15670 | Q2N6N6 | - | 3351835 - 3352884 | 36295.8 |
| rrf2 family transcriptional regulator | PQ457_15675 | Q87S29 | + | 3353360 - 3353812 | 15233.5 |
| fe-s cluster assembly protein sufb | PQ457_15680 | Q55790 | + | 3353809 - 3355290 | 54688.7 |
| hypothetical protein | PQ457_15685 | Not Available | + | 3355290 - 3355628 | 12413.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.