Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | PQ457_15540 | O88822 | + | 3320073 - 3320807 | 28022.5 |
| hypothetical protein | PQ457_15545 | Not Available | + | 3320904 - 3322226 | 47554.5 |
| m48 family metalloprotease | PQ457_15550 | Q8ZCC3 | + | 3322287 - 3323669 | 48566.7 |
| dsba family protein | PQ457_15555 | Not Available | + | 3323809 - 3324513 | 23845.0 |
| histidine kinase | PQ457_15560 | O31516 | + | 3324563 - 3325723 | 42883.1 |
| lyttr family transcriptional regulator dna-binding domain-containing protein | PQ457_15565 | Q81JL3 | + | 3325786 - 3326586 | 30551.8 |
| carboxylating nicotinate-nucleotide diphosphorylase | PQ457_15570 | P77938 | + | 3326848 - 3327708 | 29891.9 |
| hypothetical protein | PQ457_15575 | P44012 | + | 3327709 - 3328473 | 27504.6 |
| nucleoside deaminase | PQ457_15580 | A9CK16 | - | 3328470 - 3328925 | 16155.5 |
| 50s ribosomal protein l28 | PQ457_15585 | Q2GBV3 | + | 3329052 - 3329342 | 10619.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.