Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1153 domain-containing protein | PQ457_15490 | Not Available | - | 3311567 - 3311866 | 11396.9 |
| hypothetical protein | PQ457_15495 | Not Available | - | 3311863 - 3312213 | 12619.9 |
| trna 2-thiouridine(34) synthase mnma | PQ457_15500 | Q2G2Z1 | + | 3312459 - 3313541 | 38357.1 |
| hypothetical protein | PQ457_15505 | Not Available | - | 3313545 - 3313943 | 14029.1 |
| serine hydrolase | PQ457_15510 | P07062 | + | 3313972 - 3315168 | 43097.2 |
| cation diffusion facilitator family transporter | PQ457_15515 | A7MQ82 | - | 3315468 - 3316394 | 33275.0 |
| pyridoxamine 5'-phosphate oxidase | PQ457_15520 | Q2GCC6 | - | 3316406 - 3317038 | 23174.4 |
| dnaj c-terminal domain-containing protein | PQ457_15525 | A5W9N6 | + | 3317176 - 3318141 | 33198.1 |
| yihy/virulence factor brkb family protein | PQ457_15530 | O34437 | + | 3318224 - 3319195 | 36128.8 |
| enoyl-acp reductase fabi | PQ457_15535 | P58380 | + | 3319192 - 3319995 | 28741.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.