Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| short-chain fatty acyl-coa regulator family protein | PQ457_15440 | Q3J4E6 | - | 3297366 - 3298766 | 52462.9 |
| acyl-coa carboxylase subunit beta | PQ457_15445 | Q3J4E3 | + | 3298897 - 3300423 | 55233.5 |
| hypothetical protein | PQ457_15450 | Not Available | + | 3300433 - 3300672 | 8919.97 |
| methylmalonyl-coa epimerase | PQ457_15455 | Q3IZP4 | + | 3300669 - 3301106 | 15801.0 |
| methylmalonyl-coa mutase | PQ457_15460 | Q3J4D7 | + | 3301093 - 3303231 | 76990.0 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | PQ457_15465 | Q5LUF3 | + | 3303237 - 3305258 | 72877.4 |
| hypothetical protein | PQ457_15470 | Not Available | - | 3305304 - 3305564 | 9328.11 |
| duf445 domain-containing protein | PQ457_15475 | P39385 | - | 3305695 - 3306876 | 42540.1 |
| efflux rnd transporter permease subunit | PQ457_15480 | P25197 | - | 3306990 - 3310184 | 114889.0 |
| efflux rnd transporter periplasmic adaptor subunit | PQ457_15485 | D3V7P2 | - | 3310198 - 3311370 | 40915.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.