Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| merc domain-containing protein | PQ457_15390 | Not Available | - | 3289180 - 3289554 | 12666.3 |
| cox15/ctaa family protein | PQ457_15395 | Q2G350 | + | 3289742 - 3290770 | 36989.9 |
| divalent-cation tolerance protein cuta | PQ457_15400 | O58720 | + | 3290767 - 3291090 | 11400.8 |
| 50s ribosomal protein l13 | PQ457_15405 | Q11J65 | + | 3291228 - 3291707 | 17488.5 |
| 30s ribosomal protein s9 | PQ457_15410 | Q89KE5 | + | 3291707 - 3292186 | 17070.6 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | PQ457_15415 | P29785 | - | 3292248 - 3293033 | 28231.6 |
| adp-forming succinate--coa ligase subunit beta | PQ457_15420 | Q2G3G8 | + | 3293165 - 3294364 | 42261.1 |
| diguanylate cyclase | PQ457_15425 | Q9HT84 | + | 3294515 - 3296290 | 64186.7 |
| helix-turn-helix domain-containing protein | PQ457_15430 | P0ACN2 | - | 3296287 - 3296700 | 15322.6 |
| nad(p)-dependent oxidoreductase | PQ457_15435 | P71037 | + | 3296761 - 3297369 | 21133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.