Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_15290 | Not Available | - | 3268299 - 3269522 | 43707.6 |
| polysaccharide biosynthesis tyrosine autokinase | PQ457_15295 | Q45409 | - | 3269519 - 3271753 | 81273.7 |
| polysaccharide export protein | PQ457_15300 | P0A931 | - | 3271774 - 3272391 | 22222.7 |
| o-antigen ligase family protein | PQ457_15305 | Not Available | - | 3272483 - 3273820 | 47436.5 |
| hypothetical protein | PQ457_15310 | Not Available | - | 3274067 - 3274387 | 10664.1 |
| hypothetical protein | PQ457_15315 | Not Available | - | 3274655 - 3274984 | 10517.0 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | PQ457_15320 | Q44576 | - | 3275222 - 3276634 | 51964.0 |
| dna polymerase iii subunit delta | PQ457_15325 | Not Available | - | 3276822 - 3277853 | 37459.9 |
| lps assembly lipoprotein lpte | PQ457_15330 | Not Available | - | 3277850 - 3278350 | 17433.3 |
| leucine--trna ligase | PQ457_15335 | Q2G3C3 | - | 3278353 - 3280869 | 92903.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.