Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| right-handed parallel beta-helix repeat-containing protein | PQ457_15240 | Not Available | + | 3255208 - 3257883 | 91832.8 |
| gmc family oxidoreductase | PQ457_15245 | Q2MF66 | - | 3257920 - 3259464 | 56333.4 |
| aldo/keto reductase | PQ457_15250 | Q76KC2 | - | 3259461 - 3260264 | 29302.0 |
| right-handed parallel beta-helix repeat-containing protein | PQ457_15255 | Not Available | + | 3260388 - 3262319 | 67100.6 |
| hypothetical protein | PQ457_15260 | Not Available | + | 3262421 - 3263668 | 45974.1 |
| sgnh/gdsl hydrolase family protein | PQ457_15265 | Not Available | + | 3263748 - 3264461 | 25775.7 |
| glycosyltransferase | PQ457_15270 | P9WMY2 | + | 3264641 - 3265480 | 31132.0 |
| putative colanic acid biosynthesis acetyltransferase | PQ457_15275 | P0ACD2 | + | 3265491 - 3266087 | 21615.9 |
| glycosyltransferase family 2 protein | PQ457_15280 | Q9XC90 | + | 3266092 - 3267033 | 36463.6 |
| glycosyltransferase | PQ457_15285 | A7TZT2 | + | 3267030 - 3268238 | 44048.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.