Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf5935 domain-containing protein | PQ457_15140 | Not Available | - | 3232554 - 3233927 | 50075.8 |
| hypothetical protein | PQ457_15145 | Not Available | - | 3233920 - 3234084 | 6141.53 |
| glycosyltransferase, exosortase a system-associated | PQ457_15150 | D6Z995 | + | 3234234 - 3235463 | 44176.2 |
| hypothetical protein | PQ457_15155 | Not Available | + | 3235539 - 3236660 | 39176.4 |
| glutamate synthase large subunit | PQ457_15160 | P55037 | + | 3236915 - 3241555 | 167775.0 |
| glutamate synthase subunit beta | PQ457_15165 | P9WN18 | + | 3241579 - 3243015 | 52237.5 |
| hypothetical protein | PQ457_15170 | Not Available | + | 3243133 - 3243333 | 7628.45 |
| n-acetylmuramidase domain-containing protein | PQ457_15175 | Not Available | - | 3243359 - 3244012 | 23599.0 |
| uracil-dna glycosylase | PQ457_15180 | Q8UCM8 | - | 3244102 - 3244788 | 24381.1 |
| ribonuclease d | PQ457_15185 | A9H9B7 | + | 3244855 - 3245478 | 22923.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.