Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein carrier protein lola | PQ457_15090 | Q2P2R9 | - | 3221815 - 3222444 | 22528.4 |
| 50s ribosomal protein l33 | PQ457_15095 | Q2G3F0 | - | 3222550 - 3222717 | 6405.83 |
| hypothetical protein | PQ457_15100 | Not Available | - | 3222877 - 3223155 | 9480.17 |
| undecaprenyl-diphosphate phosphatase | PQ457_15105 | Q2G3F4 | - | 3223266 - 3224081 | 28621.3 |
| abc transporter transmembrane domain-containing protein | PQ457_15110 | Q5RKI8 | - | 3224116 - 3225855 | 62114.2 |
| polyhydroxyalkanoate depolymerase | PQ457_15115 | Not Available | + | 3226167 - 3227393 | 44791.9 |
| acyltransferase family protein | PQ457_15120 | Q8Y7I6 | - | 3227412 - 3229331 | 69234.8 |
| hypothetical protein | PQ457_15125 | Not Available | - | 3229331 - 3230245 | 32275.0 |
| fkbm family methyltransferase | PQ457_15130 | Q8TYL4 | + | 3230465 - 3231427 | 34973.2 |
| acyltransferase | PQ457_15135 | Q00718 | - | 3231416 - 3232510 | 40547.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.