Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | PQ457_15040 | M1VMF7 | - | 3210664 - 3212349 | 61735.7 |
| gluconate 2-dehydrogenase subunit 3 family protein | PQ457_15045 | Not Available | - | 3212371 - 3212913 | 19242.1 |
| mfs transporter | PQ457_15050 | P76417 | + | 3213057 - 3214247 | 42189.1 |
| sugar phosphate isomerase/epimerase | PQ457_15055 | Q5KYR1 | + | 3214247 - 3215227 | 35158.0 |
| gfo/idh/moca family oxidoreductase | PQ457_15060 | P55480 | + | 3215365 - 3216480 | 39588.4 |
| sugar phosphate isomerase/epimerase | PQ457_15065 | A7ZAH7 | + | 3216492 - 3217544 | 39040.1 |
| aldo/keto reductase | PQ457_15070 | A2XRZ0 | + | 3217689 - 3218684 | 35407.4 |
| lysr family transcriptional regulator | PQ457_15075 | Q01610 | + | 3218789 - 3219688 | 32843.9 |
| gtp cyclohydrolase ii | PQ457_15080 | P43525 | - | 3219700 - 3220749 | 37524.2 |
| exodeoxyribonuclease iii | PQ457_15085 | P0A1B0 | - | 3220749 - 3221537 | 29801.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.