Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dethiobiotin synthase | PQ457_14890 | Q1GT35 | - | 3171699 - 3172310 | 21344.8 |
| yggs family pyridoxal phosphate-dependent enzyme | PQ457_14895 | P24562 | - | 3172314 - 3172976 | 23292.3 |
| thiamine phosphate synthase | PQ457_14900 | Not Available | + | 3172975 - 3173523 | 19752.5 |
| dna translocase ftsk 4tm domain-containing protein | PQ457_14905 | Q8FYI0 | + | 3173603 - 3175987 | 85617.9 |
| chap domain-containing protein | PQ457_14910 | Not Available | + | 3176201 - 3176674 | 17035.4 |
| acyl-coa thioesterase | PQ457_14915 | G3ESV1 | - | 3176894 - 3177307 | 15414.0 |
| s9 family peptidase | PQ457_14920 | O07834 | - | 3177567 - 3179630 | 76636.6 |
| aminopeptidase p family protein | PQ457_14925 | Q6P1B1 | + | 3179704 - 3181506 | 64371.0 |
| voc family protein | PQ457_14930 | Not Available | + | 3181589 - 3181984 | 13731.1 |
| cupin domain-containing protein | PQ457_14935 | Not Available | + | 3181974 - 3182372 | 14332.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.