Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_14690 | P33694 | + | 3128143 - 3129288 | 41728.5 |
| glycosyltransferase family 2 protein | PQ457_14695 | P33691 | + | 3129309 - 3130370 | 37825.1 |
| integrase core domain-containing protein | PQ457_14700 | O54068 | - | 3130429 - 3131106 | 23864.7 |
| transposase | PQ457_14705 | P55640 | + | 3131199 - 3131546 | 12413.9 |
| is66 family insertion sequence element accessory protein tnpb | PQ457_14710 | P50359 | + | 3131543 - 3131890 | 12909.9 |
| is66 family transposase | PQ457_14715 | P50360 | + | 3131989 - 3133617 | 60697.8 |
| hypothetical protein | PQ457_14720 | Not Available | + | 3133617 - 3133838 | 8253.59 |
| integrase core domain-containing protein | PQ457_14725 | O54068 | - | 3133871 - 3134344 | 17076.4 |
| is110 family transposase | PQ457_14730 | Q45968 | + | 3134716 - 3135747 | 37546.1 |
| is701 family transposase | PQ457_14735 | Q00461 | + | 3136048 - 3137262 | 44593.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.