Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | PQ457_00390 | P54590 | + | 87949 - 88302 | 12822.7 |
| integration host factor subunit beta | PQ457_00395 | A8IN83 | + | 88491 - 88769 | 10396.5 |
| Trna-leu | Not Available | Not Available | + | 88911 - 88995 | Not Available |
| glycosyltransferase family 2 protein | PQ457_00405 | D4GU74 | + | 89029 - 90276 | 43711.3 |
| class i sam-dependent methyltransferase | PQ457_00410 | A0QUV5 | + | 90276 - 90974 | 25313.9 |
| gtra family protein | PQ457_00415 | Not Available | + | 90971 - 91357 | 13765.4 |
| glycosyltransferase family 4 protein | PQ457_00420 | A1T3B5 | + | 91639 - 92718 | 37807.5 |
| hypothetical protein | PQ457_00425 | Not Available | - | 92705 - 94405 | 62573.4 |
| nad(p)/fad-dependent oxidoreductase | PQ457_00430 | P37747 | + | 94580 - 96193 | 59725.6 |
| gtra family protein | PQ457_00435 | Not Available | + | 96205 - 96603 | 13566.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.