Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | PQ457_00340 | Not Available | - | 74291 - 74869 | 20323.2 |
| pilus assembly protein | PQ457_00345 | Not Available | - | 74866 - 76659 | 63613.8 |
| eal domain-containing protein | PQ457_00350 | Q9ABX9 | - | 76690 - 78705 | 73295.0 |
| ribulose-phosphate 3-epimerase | PQ457_00355 | P51012 | + | 79154 - 79816 | 23260.2 |
| heparinase ii/iii family protein | PQ457_00360 | A0A0H3C3S1 | + | 79820 - 81694 | 65639.5 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | PQ457_00365 | A8LMD0 | + | 82010 - 83584 | 55170.8 |
| peptide-methionine (s)-s-oxide reductase msra | PQ457_00370 | Q98DV6 | + | 83908 - 84585 | 24141.5 |
| transcriptional repressor | PQ457_00375 | P9WN84 | + | 84605 - 85099 | 17708.9 |
| nnru family protein | PQ457_00380 | Not Available | - | 85361 - 86047 | 24286.3 |
| peptide mfs transporter | PQ457_00385 | Q8Z6Q5 | - | 86059 - 87843 | 63362.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.