Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna pyrophosphohydrolase | PQ457_08810 | Q2G7H8 | + | 1872180 - 1872680 | 19126.7 |
| tetratricopeptide repeat protein | PQ457_08815 | Not Available | - | 1872681 - 1873265 | 20056.0 |
| rsmb/nop family class i sam-dependent rna methyltransferase | PQ457_08820 | P72943 | - | 1873293 - 1874471 | 41078.6 |
| imp dehydrogenase | PQ457_08825 | Q9KH33 | - | 1874735 - 1876192 | 51070.7 |
| ggdef domain-containing protein | PQ457_08830 | A0A0H2ZJS2 | - | 1876339 - 1877208 | 32109.7 |
| hypothetical protein | PQ457_08835 | Not Available | - | 1877422 - 1877721 | 9972.87 |
| m20/m25/m40 family metallo-hydrolase | PQ457_08840 | Q6CDE6 | - | 1877814 - 1879289 | 52405.6 |
| neutral zinc metallopeptidase | PQ457_08845 | P64431 | + | 1879530 - 1880444 | 31895.4 |
| hypothetical protein | PQ457_08850 | Not Available | + | 1880510 - 1881028 | 18169.4 |
| succinate dehydrogenase flavoprotein subunit | PQ457_08855 | Q59661 | - | 1881341 - 1883149 | 65340.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.