Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | PQ457_08710 | Q2G7E9 | - | 1846807 - 1848648 | 65027.9 |
| n-formylglutamate amidohydrolase | PQ457_08715 | Not Available | - | 1848727 - 1849488 | 27221.5 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | PQ457_08720 | Q2G7F1 | - | 1849458 - 1850285 | 28693.3 |
| hypothetical protein | PQ457_08725 | Not Available | + | 1850391 - 1851206 | 29161.1 |
| lytic transglycosylase domain-containing protein | PQ457_08730 | P0AGC4 | + | 1851332 - 1853047 | 61297.8 |
| molybdopterin-binding protein | PQ457_08735 | P0AF00 | + | 1853062 - 1853601 | 19723.7 |
| arylamine n-acetyltransferase | PQ457_08740 | O86309 | - | 1853756 - 1854634 | 31680.9 |
| pa0069 family radical sam protein | PQ457_08745 | P9WL78 | + | 1854737 - 1855816 | 40033.1 |
| dna polymerase iii subunit alpha | PQ457_08750 | Q9A700 | - | 1855817 - 1859374 | 129564.0 |
| glutathione peroxidase | PQ457_08755 | Q9CFV1 | - | 1859463 - 1859945 | 17584.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.