Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2062 domain-containing protein | PQ457_08660 | Not Available | - | 1836667 - 1837131 | 16490.5 |
| ssra-binding protein smpb | PQ457_08665 | Q2G8D5 | - | 1837233 - 1837715 | 18399.1 |
| type iii plp-dependent enzyme | PQ457_08670 | O50657 | - | 1837872 - 1839080 | 44223.4 |
| carboxynorspermidine decarboxylase | PQ457_08675 | A8FNH9 | - | 1839390 - 1840565 | 42962.1 |
| dmt family protein | PQ457_08680 | Not Available | - | 1840570 - 1840914 | 12333.5 |
| saccharopine dehydrogenase family protein | PQ457_08685 | P0DPE4 | - | 1840914 - 1842125 | 44331.2 |
| btaa family protein | PQ457_08690 | Not Available | + | 1842320 - 1843543 | 46168.0 |
| class i sam-dependent methyltransferase | PQ457_08695 | C5CSI6 | + | 1843549 - 1844202 | 24346.7 |
| class i sam-dependent rna methyltransferase | PQ457_08700 | Q9X3W2 | - | 1844219 - 1845418 | 41870.2 |
| nad(p)h-hydrate epimerase | PQ457_08705 | P37391 | - | 1845428 - 1846810 | 46736.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.