Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen synthase | PQ457_00140 | Q59643 | - | 25010 - 26017 | 35865.9 |
| atp-dependent clp protease atp-binding subunit clpa | PQ457_00145 | P05444 | - | 26111 - 28516 | 87814.2 |
| duf1192 domain-containing protein | PQ457_00150 | Not Available | - | 28665 - 28910 | 8533.88 |
| nad(p)h-quinone oxidoreductase | PQ457_00155 | Q53FA7 | + | 29005 - 30009 | 35349.9 |
| glutathione s-transferase family protein | PQ457_00160 | Q52828 | + | 30297 - 30929 | 23576.3 |
| duf1013 domain-containing protein | PQ457_00165 | Not Available | + | 31088 - 31789 | 25490.1 |
| mmcb family dna repair protein | PQ457_00170 | Not Available | - | 32118 - 32612 | 18144.1 |
| hypothetical protein | PQ457_00175 | Not Available | - | 32654 - 33046 | 13457.0 |
| Trna-arg | Not Available | Not Available | + | 33166 - 33242 | Not Available |
| beta-3-deoxy-d-manno-oct-2-ulosonic acid transferase | PQ457_00185 | P57037 | - | 33267 - 34931 | 59376.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.