Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 223): cataagtgccaacgacaa | Not Available | Not Available | + | 1813346 - 1813701 | Not Available |
| large conductance mechanosensitive channel protein mscl | PQ457_08565 | Q2G9Z8 | - | 1813782 - 1814219 | 15016.6 |
| nudix hydrolase | PQ457_08570 | Q8KP10 | + | 1814373 - 1814933 | 20662.9 |
| substrate-binding domain-containing protein | PQ457_08575 | O87590 | + | 1814997 - 1816097 | 39963.2 |
| energy transducer tonb | PQ457_08580 | B0RLE5 | + | 1816106 - 1816474 | 13424.0 |
| dead/deah box helicase | PQ457_08585 | P25888 | - | 1816509 - 1817963 | 54136.9 |
| hypothetical protein | PQ457_08590 | Not Available | - | 1818111 - 1818719 | 22288.9 |
| fad-binding oxidoreductase | PQ457_08595 | O23240 | + | 1818872 - 1820302 | 49772.6 |
| sapc family protein | PQ457_08600 | Not Available | + | 1820407 - 1821192 | 28906.6 |
| n-formylglutamate amidohydrolase | PQ457_08605 | Q9HU92 | - | 1821516 - 1822469 | 33907.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.