Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | PQ457_08460 | Q1GTD8 | - | 1792466 - 1793770 | 46211.1 |
| had-ia family hydrolase | PQ457_08465 | Q8UEY9 | + | 1793891 - 1794568 | 24113.1 |
| duf2794 domain-containing protein | PQ457_08470 | Not Available | - | 1794565 - 1794915 | 13017.9 |
| serine acetyltransferase | PQ457_08475 | Q06750 | - | 1794925 - 1795617 | 24659.6 |
| atpase | PQ457_08480 | Not Available | - | 1795674 - 1796315 | 23047.6 |
| heavy-metal-associated domain-containing protein | PQ457_08485 | Not Available | - | 1796322 - 1797641 | 45163.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | PQ457_08490 | Q2G9X9 | + | 1797740 - 1798849 | 38624.1 |
| phosphoribosylglycinamide formyltransferase | PQ457_08495 | P00967 | + | 1798842 - 1799795 | 34178.8 |
| hypothetical protein | PQ457_08500 | Not Available | - | 1799786 - 1800241 | 16225.4 |
| nucleoside-diphosphate kinase | PQ457_08505 | Q2G9Y4 | - | 1800381 - 1800803 | 15330.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.