Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | PQ457_08410 | Q2G9I7 | + | 1776769 - 1777548 | 29650.6 |
| hypothetical protein | PQ457_08415 | Not Available | - | 1777626 - 1777868 | 8947.06 |
| insulinase family protein | PQ457_08420 | Q9FJT9 | + | 1777976 - 1780903 | 106605.0 |
| efflux rnd transporter periplasmic adaptor subunit | PQ457_08425 | P52477 | + | 1781174 - 1782307 | 39662.7 |
| efflux rnd transporter permease subunit | PQ457_08430 | P31224 | + | 1782329 - 1785487 | 112340.0 |
| efflux transporter outer membrane subunit | PQ457_08435 | Q9KJC1 | + | 1785484 - 1786911 | 49497.8 |
| phosphoribosylformylglycinamidine synthase subunit purs | PQ457_08440 | P12049 | + | 1787059 - 1787289 | 8419.16 |
| phosphoribosylformylglycinamidine synthase subunit purq | PQ457_08445 | Q2G9J6 | + | 1787293 - 1787964 | 23693.4 |
| eal domain-containing protein | PQ457_08450 | Q9I310 | - | 1788008 - 1790398 | 86222.0 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | PQ457_08455 | Q5NRH4 | - | 1790542 - 1792365 | 65357.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.