Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PQ457_08160 | P30864 | + | 1729646 - 1730578 | 33852.5 |
| hypothetical protein | PQ457_08165 | Not Available | - | 1730562 - 1731089 | 19239.4 |
| hypothetical protein | PQ457_08170 | Not Available | - | 1731171 - 1731497 | 11476.0 |
| duf983 domain-containing protein | PQ457_08175 | Not Available | - | 1731538 - 1731963 | 15945.6 |
| urca family protein | PQ457_08180 | Not Available | - | 1732600 - 1732908 | 10575.8 |
| hypothetical protein | PQ457_08185 | Not Available | - | 1733243 - 1734151 | 32923.1 |
| discoidin domain-containing protein | PQ457_08190 | Not Available | - | 1734359 - 1736494 | 78058.7 |
| cyclopropane-fatty-acyl-phospholipid synthase | PQ457_08195 | P31049 | - | 1736573 - 1737844 | 48279.0 |
| diguanylate cyclase | PQ457_08200 | P76245 | - | 1737963 - 1738988 | 37222.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PQ457_08205 | O08437 | + | 1739143 - 1739787 | 21471.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.