Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pentapeptide repeat-containing protein | PQ457_07780 | Not Available | - | 1666712 - 1667404 | 25456.4 |
| hypothetical protein | PQ457_07785 | Not Available | - | 1667401 - 1667664 | 9818.76 |
| chemotaxis protein chew | PQ457_07790 | Q2KCI0 | - | 1667687 - 1669111 | 49272.1 |
| pas domain-containing methyl-accepting chemotaxis protein | PQ457_07795 | Q9I3S1 | - | 1669149 - 1671926 | 101427.0 |
| cytochrome c peroxidase | PQ457_07800 | Q50233 | - | 1672046 - 1672966 | 33442.9 |
| hypothetical protein | PQ457_07805 | Not Available | - | 1672963 - 1673490 | 18004.8 |
| tonb-dependent receptor | PQ457_07810 | Q8DD41 | + | 1673584 - 1675665 | 75645.0 |
| hypothetical protein | PQ457_07815 | Not Available | - | 1675659 - 1676198 | 19444.8 |
| hypothetical protein | PQ457_07820 | Not Available | - | 1676430 - 1676615 | 6555.53 |
| mbl fold metallo-hydrolase | PQ457_07825 | Q7MUY1 | - | 1676612 - 1677391 | 28703.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.