Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | PQ457_07730 | Q6F8G6 | - | 1653087 - 1653866 | 26880.6 |
| molybdopterin-dependent oxidoreductase | PQ457_07735 | Q06457 | - | 1653863 - 1656475 | 92854.8 |
| nitrite reductase small subunit nird | PQ457_07740 | P42436 | - | 1656472 - 1656837 | 13005.6 |
| nitrite reductase large subunit nirb | PQ457_07745 | P42435 | - | 1656834 - 1659281 | 87929.0 |
| alginate export family protein | PQ457_07750 | Not Available | - | 1659590 - 1660879 | 46541.5 |
| cmpa/nrta family abc transporter substrate-binding protein | PQ457_07755 | P73450 | - | 1661205 - 1662422 | 44072.8 |
| antar domain-containing protein | PQ457_07760 | P9WGM2 | - | 1662419 - 1663000 | 21185.6 |
| protein kinase | PQ457_07765 | Q9CEF5 | - | 1663209 - 1664897 | 60780.9 |
| nark/nasa family nitrate transporter | PQ457_07770 | P42432 | + | 1664993 - 1666216 | 42606.8 |
| duf159 family protein | PQ457_07775 | Not Available | - | 1666226 - 1666708 | 17621.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.