Novosphingobium humi R1-4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium humi
StrainR1-4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium humi R1-4

Accession NumberCP117417.1

Gene Summary

Adenine Count

624047 bp

Thymine Count

625173 bp

Guanine Count

1097387 bp

Cytosine Count

1092600 bp

Genome Length

3439207 bp

Protein-coding Genes

3068 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rna chaperone hfqPQ457_07630B8IDE7+1629308 - 162990721806.3
gtpase hflxPQ457_07635A0L4B2+1629955 - 163123247044.6
nucleoside triphosphate pyrophosphohydrolasePQ457_07640P0AEY4-1631307 - 163208628574.7
mfs transporterPQ457_07645P0AA79-1632174 - 163345746642.2
2-keto-4-pentenoate hydratasePQ457_07650P49155-1633491 - 163428226610.5
altronate dehydratase family proteinPQ457_07655O34673-1634388 - 163589651522.4
laci family dna-binding transcriptional regulatorPQ457_07660O87590+1636059 - 163707837555.0
5-dehydro-4-deoxy-d-glucuronate isomerasePQ457_07665B4RGF4+1637204 - 163804031020.1
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdudPQ457_07670P37769+1638045 - 163881226364.4
sugar kinasePQ457_07675D4GSE6+1638809 - 163983136137.2

Displaying genes 1611 – 1620 of 4435 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites