Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease recj | PQ457_07530 | P39693 | - | 1606413 - 1608119 | 59988.4 |
| hypothetical protein | PQ457_07535 | Not Available | + | 1608400 - 1609146 | 26298.9 |
| ahh domain-containing protein | PQ457_07540 | Not Available | + | 1609245 - 1609748 | 19073.3 |
| hypothetical protein | PQ457_07545 | Not Available | + | 1609779 - 1610411 | 22823.8 |
| hypothetical protein | PQ457_07550 | Not Available | + | 1610445 - 1610984 | 19605.0 |
| methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfo | PQ457_07555 | Q2G718 | - | 1610981 - 1612339 | 49185.9 |
| duf952 domain-containing protein | PQ457_07560 | Not Available | - | 1612616 - 1612963 | 11840.4 |
| dna gyrase subunit a | PQ457_07565 | Q92IZ6 | - | 1612960 - 1615692 | 99188.3 |
| hypothetical protein | PQ457_07570 | Not Available | + | 1615985 - 1617241 | 44111.7 |
| carbonic anhydrase | PQ457_07575 | Q94CE4 | - | 1617314 - 1617979 | 23855.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.