Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | PQ457_07430 | B0T2A6 | + | 1584011 - 1585603 | 58932.1 |
| 2og-fe(ii) oxygenase | PQ457_07435 | P13674 | - | 1585843 - 1586532 | 25901.4 |
| rcnb family protein | PQ457_07440 | Not Available | - | 1586607 - 1587560 | 35024.4 |
| energy-dependent translational throttle protein etta | PQ457_07445 | P9WQK2 | - | 1587751 - 1589430 | 62088.5 |
| m28 family peptidase | PQ457_07450 | Q17QK3 | + | 1589569 - 1590870 | 45245.8 |
| hypothetical protein | PQ457_07455 | Not Available | - | 1590872 - 1591936 | 38995.3 |
| methyl-accepting chemotaxis protein | PQ457_07460 | P55652 | + | 1592094 - 1593572 | 51430.8 |
| tigr03013 family pep-cterm/xrta system glycosyltransferase | PQ457_07465 | B3FN88 | + | 1593699 - 1595084 | 51697.6 |
| pep-cterm system histidine kinase prsk | PQ457_07470 | P10047 | + | 1595086 - 1597191 | 76896.2 |
| pep-cterm-box response regulator transcription factor | PQ457_07475 | Q06065 | + | 1597193 - 1598554 | 49502.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.